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Placement of the Structural Proteins in Sindbis Virus
1LD4
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Virus  [ VIPERdb   ]
    Structure Weight: 361060.72
    Molecule: Coat protein C
    Polymer: 1 Type: protein Length: 264
    Chains: A, B, C, D
    EC#: 3.4.21.90   
    Organism: Sindbis virus
    UniProtKB: Protein Feature View | Search PDB | P03316  
    Molecule: GENERAL CONTROL PROTEIN GCN4
    Polymer: 2 Type: protein Length: 57
    Chains: E, F, G, H, I, J, K, L
    Fragment: LEUCINE-ZIPPER (residues 225-281)
    Organism: Saccharomyces cerevisiae
    Gene Names: GCN4 AAS3 ARG9 YEL009C
    UniProtKB: Protein Feature View | Search PDB | P03069  
    Molecule: Spike glycoprotein E1
    Polymer: 3 Type: protein Length: 439
    Chains: M, N, O, P
    Organism: Sindbis virus
    UniProtKB: Protein Feature View | Search PDB | P03316  
     

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Sindbis virus   Taxonomy    
    Polymer: 2
    Scientific Name: Saccharomyces cerevisiae   Taxonomy   Common Name: Baker's yeast  
    Polymer: 3
    Scientific Name: Sindbis virus   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    1I9W  Semliki Forest Virus Glycoprotein E1 
    1WYK  Sindbis Virus Capsid Protein (114-264) 
    1YSA  GCN4 Leucine Zipper 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    UNX
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    UNX X
    UNKNOWN ATOM OR ION
     
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Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
No info available for origin of biological assembly
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  •   Deposition Summary Hide
    Authors:   Zhang, W.,  Mukhopadhyay, S.,  Pletnev, S.V.,  Baker, T.S.,  Kuhn, R.J.,  Rossmann, M.G.

    Deposition:   2002-04-08
    Release:   2002-11-04
    Last Modified (REVDAT):   2009-06-09
     
  •   Revision History    Hide
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    2011-07-13
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  •   Experimental Details Hide
    Method:   ELECTRON MICROSCOPY
    Exp. Data:
    N/A

    EM Resolution [Å]: 11.4
    Aggregation State: PARTICLE
    Symmetry Type: ICOSAHEDRAL Reconstruction Method: SINGLE PARTICLE
    Specimen Type: VITREOUS ICE (CRYO EM)