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Xray Structure of Grb2 SH2 Domain Complexed with a Phosphorylated Peptide
1JYR
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Signaling Protein/inhibitor
    Structure Weight: 12142.75
    Molecule: GROWTH FACTOR RECEPTOR-BOUND PROTEIN 2
    Polymer: 1 Type: protein Length: 96
    Chains: A
    Fragment: SH2 Domain
    Organism: Homo sapiens
    Gene Names: Gene View for GRB2 ASH
    UniProtKB: Protein Feature View | Search PDB | P62993  
    Molecule: peptide: PSpYVNVQN
    Polymer: 2 Type: protein Length: 9
    Chains: L
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Synthetic construct   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    1JYQ  xray structure of Grb2 SH2 domain complexed with a doubly phosphorylated pseudopeptide 
    1JYU  xray structure of Grb2 SH2 domain 
     
  •   Modified Residues Hide
    Identifier Formula Parent Type
    PTR
    Search 
    PTR C9 H12 N O6 P TYR lPeptideLinking
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly 1       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Nioche, P.,  Liu, W.-Q.,  Broutin, I.,  Charbonnier, F.,  Latreille, M.-T.,  Vidal, M.,  Roques, B.,  Garbay, C.,  Ducruix, A.

    Deposition:   2001-09-13
    Release:   2002-03-13
    Last Modified (REVDAT):   2011-07-13
     
  •   Revision History    Hide
    Mouse over text for details
    2011-07-13
    Binding sites and description
    2011-07-13
    Non-polymer description
    2011-07-13
    Function and keywords
    2011-07-13
    Linkage
    2011-07-13
    Sequence database correspondence
    2011-07-13
    Polymer description
    2011-07-13
    Version format compliance
    2011-07-13
    Atom nomenclature
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   1.55
    R-Value: 0.190 (work)
    R-Free: 0.228
    Space Group: P 41 21 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 50.80 α = 90.00 
    b = 50.80 β = 90.00 
    c = 89.44 γ = 90.00