1JTT

Degenerate interfaces in antigen-antibody complexes

Structural Biology Knowledgebase: 1JTT SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.204
  • R-Value Work: 0.164

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1JTT

Classification: Immune system Lysozyme

Total Structure Weight: 28883.77

Macromolecule Entities
Molecule Chains Length Organism Details
Vh Single-Domain Antibody A 133 Camelus dromedarius Fragment: VH domain fragment
Lysozyme L 129 Gallus gallus EC#: 3.2.1.17 IUBMB
Fragment: Enzyme
Gene Name(s): LYZ Gene View

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FMT
Query on FMT

A, L FORMIC ACID
C H2 O2
BDAGIHXWWSANSR-UHFFFAOYSA-N
Ligand Explorer
 
JSmol
NA
Query on NA

A, L SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
Ligand Explorer
 
JSmol

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.204
  • R-Value Work: 0.164
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 128.22 α = 90.00
b = 72.84 β = 106.94
c = 38.66 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-08-22
  • Released Date: 2001-12-05
  • Deposition author(s): Decanniere, K., Transue, T.R., Desmyter, A., Maes, D., Muyldermans, S., Wyns, L.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4