1JFF

Refined structure of alpha-beta tubulin from zinc-induced sheets stabilized with taxol

Structural Biology Knowledgebase: 1JFF SBKB.org


Experimental Data Snapshot

  • Method: ELECTRON CRYSTALLOGRAPHY

Currently 1JFF does not have a wwPDB validation report.


Literature

Macromolecules
Sequence Display for 1JFF

Classification: STRUCTURAL PROTEIN

Total Structure Weight: 101925.89

Macromolecule Entities
Molecule Chains Length Organism Details
tubulin alpha chain A 451 Bos taurus Gene Name(s):
tubulin beta chain B 445 Bos taurus Gene Name(s): TUBB2B Gene View

Small Molecules
Ligands 5 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
TA1
Query on TA1

B TAXOL
C47 H51 N O14
RCINICONZNJXQF-MZXODVADSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GTP
Query on GTP

A GUANOSINE-5'-TRIPHOSPHATE
C10 H16 N5 O14 P3
XKMLYUALXHKNFT-UUOKFMHZSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GDP
Query on GDP

B GUANOSINE-5'-DIPHOSPHATE
C10 H15 N5 O11 P2
QGWNDRXFNXRZMB-UUOKFMHZSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

A ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: ELECTRON CRYSTALLOGRAPHY

Unit Cell:

Length (Å) Angle (°)
a = 81.20 α = 90.00
b = 93.50 β = 90.00
c = 90.00 γ = 90.00

Structure Validation

Currently 1JFF does not have a validation report.



Entry History

Deposition Data

  • Deposited Date: 2001-06-20
  • Released Date: 2001-09-19
  • Deposition author(s): Lowe, J., Li, H., Downing, K.H., Nogales, E.

Revision History

  • 2014-06-11
    Type: Binding sites and description | Details: corrected site records
  • 2014-06-11
    Type: Sequence database correspondence | Details: Corrected sequence database references
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4