PHOSPHATE INHIBITED BACILLUS PASTEURII UREASE CRYSTAL STRUCTURE
1IE7
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Hydrolase
    Structure Weight: 87026.47
    Molecule: UREASE GAMMA SUBUNIT
    Polymer: 1 Type: protein Length: 100
    Chains: A
    EC#: 3.5.1.5   
    Organism: Sporosarcina pasteurii
    Gene Name: ureA
    UniProtKB: Search PDB | P41022   Protein Feature View
    Molecule: UREASE BETA SUBUNIT
    Polymer: 2 Type: protein Length: 126
    Chains: B
    EC#: 3.5.1.5   
    Organism: Sporosarcina pasteurii
    Gene Name: ureB
    UniProtKB: Search PDB | P41021   Protein Feature View
    Molecule: UREASE ALPHA SUBUNIT
    Polymer: 3 Type: protein Length: 570
    Chains: C
    EC#: 3.5.1.5   
    Organism: Sporosarcina pasteurii
    Gene Name: ureC
    UniProtKB: Search PDB | P41020   Protein Feature View
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Sporosarcina pasteurii   Taxonomy    
    Polymer: 2
    Scientific Name: Sporosarcina pasteurii   Taxonomy    
    Polymer: 3
    Scientific Name: Sporosarcina pasteurii   Taxonomy    
     
  •   Related PDB Entries Hide
    Identifier Details
    1ubp   mercaptoethanol inhibited BACILLUS PASTEURII UREASE CRYSTAL STRUCTURE 
    2ubp   NATIVE BACILLUS PASTEURII UREASE CRYSTAL STRUCTURE 
    3ubp   Diamidophosphate inhibited BACILLUS PASTEURII UREASE CRYSTAL STRUCTURE 
    4ubp   Acetohydroxamic acid inhibited BACILLUS PASTEURII UREASE CRYSTAL STRUCTURE 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    NI
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    NI Ni
    NICKEL (II) ION
    PO4
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    PO4 O4 P
    PHOSPHATE ION
     
  •   Modified Residues Hide
    Identifier Formula Parent Type
    CXM
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    CXM C6 H11 N O4 S MET lPeptideLinking
    KCX
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    KCX C7 H14 N2 O4 LYS lPeptideLinking
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly 1       
Biological assembly 1 assigned by authors and generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Benini, S.,  Rypniewski, W.R.,  Wilson, K.S.,  Ciurli, S.,  Mangani, S.

    Deposition:   2001-04-09
    Release:   2001-04-25
    Last Modified (REVDAT):   2011-07-13
     
  •   Revision History    Hide
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    2011-07-13
    Version format compliance
    2011-07-13
    Non-polymer description
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   1.85
    R-Value: 0.190 (obs.)
    R-Free: 0.210
    Space Group: P 63 2 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 131.49 α = 90.00 
    b = 131.49 β = 90.00 
    c = 189.49 γ = 120.00