1GX6

Hepatitis C Virus RNA polymerase in complex with UTP and manganese

Structural Biology Knowledgebase: 1GX6 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.229
  • R-Value Work: 0.197

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1GX6

Classification: TRANSFERASE

Total Structure Weight: 61346.22

Macromolecule Entities
Molecule Chains Length Organism Details
RNA-DIRECTED RNA POLYMERASE A 531 Hepatitis c virus EC#: 2.7.7.48 IUBMB
Fragment: CATALYTIC DOMAIN, RESIDUES 2420-2950
Gene Name(s):

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
UTP
Query on UTP

A URIDINE 5'-TRIPHOSPHATE
C9 H15 N2 O15 P3
PGAVKCOVUIYSFO-XVFCMESISA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MN
Query on MN

A MANGANESE (II) ION
Mn
WAEMQWOKJMHJLA-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.85 Å
  • R-Value Free: 0.229
  • R-Value Work: 0.197
  • Space Group: P 21 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 67.09 α = 90.00
b = 96.63 β = 90.00
c = 96.34 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-03-27
  • Released Date: 2002-04-10
  • Deposition author(s): Bressanelli, S., Rey, F.A.

Revision History

  • 2015-10-28
    Type: Function and keywords | Details: KEYWDS
  • 2015-10-28
    Type: Source and taxonomy | Details: SOURCE
  • 2015-10-28
    Type: Biological assembly | Details: REMARK 300,REMARK 350
  • 2015-10-28
    Type: Version format compliance | Details: REMARK 4
  • 2015-10-28
    Type: Refinement description | Details: REMARK 3
  • 2015-10-28
    Type: Non-polymer description | Details: FORMUL
  • 2015-10-28
    Type: Other | Details: REMARK 525,HEADER