1GT0

Crystal structure of a POU/HMG/DNA ternary complex

Structural Biology Knowledgebase: 1GT0 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.285
  • R-Value Work: 0.232

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1GT0

Classification: TRANSCRIPTION

Total Structure Weight: 42898.30


Macromolecule Entities
Molecule Chains Length Organism Details
OCTAMER-BINDING TRANSCRIPTION FACTOR 1 C 159 Homo sapiens Fragment: POU DOMAIN RESIDUES 280-438
Mutation: C61S, C150S
Gene Name(s): POU2F1 Gene View OCT1 OTF1
TRANSCRIPTION FACTOR SOX-2 D 80 Mus musculus Fragment: HMG DOMAIN RESIDUES 41-120
Gene Name(s): Sox2 Sox-2
Macromolecule Entities
Molecule Chains Length Organism Details
5'-D(*TP*TP*CP*TP*TP*TP*GP*TP*TP*TP* GP*GP*AP* TP*GP*CP*TP*AP*AP*TP*GP*GP*GP*A)-3' A 24 Mus musculus FGF-4 ENHANCER
5'-D(*AP*TP*CP*CP*CP*AP*TP*TP*AP*GP* CP*AP*TP*CP*CP*AP*AP*AP*CP*AP*AP*AP*GP*A)-3' B 24 Mus musculus FGF-4 ENHANCER


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.285
  • R-Value Work: 0.232
  • Space Group: P 31 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 72.80 α = 90.00
b = 72.80 β = 90.00
c = 172.40 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-01-09
  • Released Date: 2003-01-30
  • Deposition author(s): Remenyi, A., Wilmanns, M.

Revision History

  • 2012-11-14
    Type: Refinement description | Details: REMARK 3
  • 2012-11-14
    Type: Non-polymer description | Details: FORMUL
  • 2012-11-14
    Type: Biological assembly | Details: REMARK 350
  • 2012-11-14
    Type: Other | Details: REMARK 465,REMARK 470,REMARK 525,HEADER,REMARK 900
  • 2012-11-14
    Type: Sequence database correspondence | Details: DBREF
  • 2012-11-14
    Type: Geometry validation | Details: REMARK 500