1COW

BOVINE MITOCHONDRIAL F1-ATPASE COMPLEXED WITH AUROVERTIN B

Structural Biology Knowledgebase: 1COW SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.1 Å
  • R-Value Observed: 0.231

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1COW

Classification: HYDROGEN ION TRANSPORT

Total Structure Weight: 354864.38

Macromolecule Entities
Molecule Chains Length Organism Details
BOVINE MITOCHONDRIAL F1-ATPASE A, B, C 510 Bos taurus EC#: 3.6.3.14 IUBMB
Mutation: S481G
Gene Name(s): ATP5A1 Gene View ATP5A2
BOVINE MITOCHONDRIAL F1-ATPASE D, E, F 482 Bos taurus EC#: 3.6.3.14 IUBMB
Gene Name(s): ATP5B Gene View
BOVINE MITOCHONDRIAL F1-ATPASE G 272 Bos taurus EC#: 3.6.3.14 IUBMB
Gene Name(s): ATP5C1 Gene View ATP5C

Membrane Protein

Source: mpstruc | Group: ALPHA-HELICAL

Subgroup Name: F-type ATPase

Protein Name: ATP synthase (F1c10)


Small Molecules
Ligands 4 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ANP
Query on ANP

A, B, C, F PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
C10 H17 N6 O12 P3
PVKSNHVPLWYQGJ-KQYNXXCUSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
AUR
Query on AUR

E, F AUROVERTIN B
C25 H32 O8
QXCOFYWOWZJFEA-YJMRODJJSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ADP
Query on ADP

D ADENOSINE-5'-DIPHOSPHATE
C10 H15 N5 O10 P2
XTWYTFMLZFPYCI-KQYNXXCUSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A, B, C, D, F MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.1 Å
  • R-Value Observed: 0.231
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 283.40 α = 90.00
b = 107.60 β = 90.00
c = 140.20 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1996-05-08
  • Released Date: 1996-08-17
  • Deposition author(s): Van Raaij, M., Abrahams, J.P., Leslie, A.G.W., Walker, J.E.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4