1CC0

CRYSTAL STRUCTURE OF THE RHOA.GDP-RHOGDI COMPLEX

Structural Biology Knowledgebase: 1CC0 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 5.0 Å
  • R-Value Work:

Literature

Macromolecules
Sequence Display for 1CC0

Classification: SIGNALING PROTEIN

Total Structure Weight: 90293.17

Macromolecule Entities
Molecule Chains Length Organism Details
transforming protein rhoA A, C 190 Homo sapiens Mutation: F25N
Gene Name(s): RHOA Gene View ARH12 ARHA RHO12
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
rho GDP dissociation inhibitor alpha E, F 204 Homo sapiens Gene Name(s): ARHGDIA Gene View GDIA1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GDP
Query on GDP

A, C GUANOSINE-5'-DIPHOSPHATE
C10 H15 N5 O11 P2
QGWNDRXFNXRZMB-UUOKFMHZSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A, C MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 5.0 Å
  • R-Value Observed:
  • Space Group: P 65 2 2

Unit Cell:

Length (Å) Angle (°)
a = 139.30 α = 90.00
b = 139.30 β = 90.00
c = 253.10 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-03-03
  • Released Date: 2000-01-07
  • Deposition author(s): Longenecker, K.L., Read, P., Derewenda, U., Dauter, Z., Garrard, S., Walker, L., Somlyo, A.V., Somlyo, A.P., Nakamoto, R.K., Derewenda, Z.S.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4