9ANT

ANTENNAPEDIA HOMEODOMAIN-DNA COMPLEX

Structural Biology Knowledgebase: 9ANT SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.239
  • R-Value Work: 0.218

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 9ANT

Classification: TRANSCRIPTION / DNA

Total Structure Weight: 34593.84


Macromolecule Entities
Molecule Chains Length Organism Details
ANTENNAPEDIA HOMEODOMAIN A, B 62 Drosophila melanogaster Fragment: HOMEODOMAIN
Mutation: C39S
Gene Name(s): Antp CG1028
Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(*AP*GP*AP*AP*AP*GP*CP*CP*AP*TP*TP*AP*GP*AP*G)-3') C, E 15 synthetic
DNA (5'-D(*TP*CP*TP*CP*TP*AP*AP*TP*GP*GP*CP*TP*TP*TP*C)-3') D, F 15 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NI
Query on NI

B NICKEL (II) ION
Ni
VEQPNABPJHWNSG-UHFFFAOYSA-N
Ligand Explorer
 
JSmol

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.239
  • R-Value Work: 0.218
  • Space Group: P 2 2 21

Unit Cell:

Length (Å) Angle (°)
a = 61.05 α = 90.00
b = 77.75 β = 90.00
c = 94.42 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1998-07-02
  • Released Date: 1998-10-14
  • Deposition author(s): Fraenkel, E., Pabo, C.O.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4