Structural basis for MTA1c-mediated DNA N6-adenine methylation
Chen, J., Hu, R., Chen, Y., Lin, X., Xiang, W., Chen, H., Yao, C., Liu, L.(2022) Nat Commun 13: 3257
Experimental Data Snapshot
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
MT-a70 family protein | A, B [auth E], C [auth H], D [auth K] | 247 | Tetrahymena thermophila SB210 | Mutation(s): 0  Gene Names: MTA1 | |
UniProt | |||||
Find proteins for Q22GC0 (Tetrahymena thermophila (strain SB210)) Explore Q22GC0  Go to UniProtKB:  Q22GC0 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q22GC0 | ||||
Sequence AnnotationsExpand | |||||
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Entity ID: 2 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Ptep2 | E [auth B], F [auth D], G, H [auth J] | 128 | Paramecium tetraurelia strain d4-2 | Mutation(s): 0  | |
UniProt | |||||
Find proteins for A0DWP1 (Paramecium tetraurelia) Explore A0DWP1  Go to UniProtKB:  A0DWP1 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | A0DWP1 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 1 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
SAM (Subject of Investigation/LOI) Query on SAM | I [auth A], J [auth E], K [auth H], L [auth K] | S-ADENOSYLMETHIONINE C15 H22 N6 O5 S MEFKEPWMEQBLKI-FCKMPRQPSA-N |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 98.13 | α = 90 |
b = 110.193 | β = 91.642 |
c = 102.636 | γ = 90 |
Software Name | Purpose |
---|---|
PHENIX | refinement |
PHENIX | refinement |
HKL-3000 | data reduction |
HKL-3000 | data scaling |
PHASER | phasing |
Funding Organization | Location | Grant Number |
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National Natural Science Foundation of China (NSFC) | China | 32022047 |