7R1N

Crystal structure of the Tetrameric C-terminal Big_2-CBM56 domains from Paenibacillus illinoisensis (Bacillus circulans IAM1165) beta-1,3-glucanase H

PDB DOI: https://doi.org/10.2210/pdb7R1N/pdb

Classification: HYDROLASE
Organism(s): Paenibacillus illinoisensis
Expression System: Escherichia coli BL21
Mutation(s): No

Deposited: 2022-02-03 Released: 2023-02-15
Deposition Author(s): Najmudin, S., Venditto, I., Fontes, C.M.G.A., Bule, P.
Funding Organization(s): Fundacao para a Ciencia e a Tecnologia, European Communitys Seventh Framework Programme

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.07 Å
R-Value Free: 0.271
R-Value Work: 0.210

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

Structural and biochemical characterization of C-terminal Big_2-CBM56 domains of Paenibacillus illinoisensis IAM1165 beta-1,3-glucanase H and Paenibacillus sp CBM56

Najmudin, S., Venditto, I., Pires, V.R., Caseiro, C., Correia, M.A.S., Romao, M.J., Carvalho, A.L., Fontes, C.M.G.A., Bule, P.

To be published.

Macromolecule Content

Total Structure Weight: 87.18 kDa
Atom Count: 5,772
Modelled Residue Count: 736
Deposited Residue Count: 828
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Beta-1,3-glucanase bglH	A [auth AAA], B [auth BBB], C [auth CCC], D [auth DDD]	207	Paenibacillus illinoisensis	Mutation(s): 0 Gene Names: bglH, beta-1, 3-glucanase
UniProt
Find proteins for Q45095 (Niallia circulans) Explore Q45095 Go to UniProtKB: Q45095
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	Q45095
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 5 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
PG4 Query on PG4 Download Ideal Coordinates CCD File SDF format, chain E [auth AAA] SDF format, chain L [auth BBB] SDF format, chain P [auth CCC] SDF format, chain R [auth DDD] MOL2 format, chain E [auth AAA] MOL2 format, chain L [auth BBB] MOL2 format, chain P [auth CCC] MOL2 format, chain R [auth DDD]	E [auth AAA], L [auth BBB], P [auth CCC], R [auth DDD]	TETRAETHYLENE GLYCOL C₈ H₁₈ O₅ UWHCKJMYHZGTIT-UHFFFAOYSA-N		Interactions Focus chain E [auth AAA] Focus chain L [auth BBB] Focus chain P [auth CCC] Focus chain R [auth DDD] Interactions & Density Focus chain E [auth AAA] Focus chain L [auth BBB] Focus chain P [auth CCC] Focus chain R [auth DDD]
PEG Query on PEG Download Ideal Coordinates CCD File SDF format, chain F [auth AAA] SDF format, chain G [auth AAA] SDF format, chain I [auth AAA] SDF format, chain M [auth BBB] MOL2 format, chain F [auth AAA] MOL2 format, chain G [auth AAA] MOL2 format, chain I [auth AAA] MOL2 format, chain M [auth BBB]	F [auth AAA], G [auth AAA], I [auth AAA], M [auth BBB]	DI(HYDROXYETHYL)ETHER C₄ H₁₀ O₃ MTHSVFCYNBDYFN-UHFFFAOYSA-N		Interactions Focus chain F [auth AAA] Focus chain G [auth AAA] Focus chain I [auth AAA] Focus chain M [auth BBB] Interactions & Density Focus chain F [auth AAA] Focus chain G [auth AAA] Focus chain I [auth AAA] Focus chain M [auth BBB]
GOL Query on GOL Download Ideal Coordinates CCD File SDF format, chain H [auth AAA] SDF format, chain S [auth DDD] MOL2 format, chain H [auth AAA] MOL2 format, chain S [auth DDD]	H [auth AAA], S [auth DDD]	GLYCEROL C₃ H₈ O₃ PEDCQBHIVMGVHV-UHFFFAOYSA-N		Interactions Focus chain H [auth AAA] Focus chain S [auth DDD] Interactions & Density Focus chain H [auth AAA] Focus chain S [auth DDD]
CL Query on CL Download Ideal Coordinates CCD File SDF format, chain J [auth AAA] SDF format, chain N [auth BBB] MOL2 format, chain J [auth AAA] MOL2 format, chain N [auth BBB]	J [auth AAA], N [auth BBB]	CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M		Interactions Focus chain J [auth AAA] Focus chain N [auth BBB] Interactions & Density Focus chain J [auth AAA] Focus chain N [auth BBB]
MG Query on MG Download Ideal Coordinates CCD File SDF format, chain K [auth AAA] SDF format, chain O [auth BBB] SDF format, chain Q [auth CCC] SDF format, chain T [auth DDD] MOL2 format, chain K [auth AAA] MOL2 format, chain O [auth BBB] MOL2 format, chain Q [auth CCC] MOL2 format, chain T [auth DDD]	K [auth AAA], O [auth BBB], Q [auth CCC], T [auth DDD]	MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N		Interactions Focus chain K [auth AAA] Focus chain O [auth BBB] Focus chain Q [auth CCC] Focus chain T [auth DDD] Interactions & Density Focus chain K [auth AAA] Focus chain O [auth BBB] Focus chain Q [auth CCC] Focus chain T [auth DDD]