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CRYSTAL STRUCTURE OF YEAST PHENYLALANINE T-RNA. I.CRYSTALLOGRAPHIC REFINEMENT
 
 
DOI:10.2210/pdb6tna/pdb   NDB ID: TRNA04
6TNA
 
Primary Citation
spinning wheel
 
 
  •  
    Move Section Molecular Description Hide
    Classification: T RNA
    Structure Weight: 24989.52
     
    Molecule:TRNAPHE
    Polymer:1Type:polyribonucleotideLength:76
    Chains:A
     
     
  •  
    Move Section Source Hide
    Polymer: 1
    Scientific Name: Saccharomyces cerevisiae Go to NCBI Taxonomy entry Common Name: Baker's yeast  
     
     
  •  
    Move Section Ligand Chemical Component Hide
    Identifier Name Formula Interaction View Links
    MG     MAGNESIUM ION Mg 3DLigand Explorer Link out to Ligand Expos:MG Link out to SuperLigands:MG Link out to SuperHapten:MG
     
     
  •  
    Move Section Modified Residues Hide
    Identifier Name Formula Interaction View Links
    2MG 2N-METHYLGUANOSINE-5'-MONOPHOSPHATE (parent: G)(type: rnaLinking) C11 H16 N5 O8 P Link out to Ligand Expos:2MG Link out to SuperLigands:2MG Link out to SuperHapten:2MG 2D
    H2U 5,6-DIHYDROURIDINE-5'-MONOPHOSPHATE (parent: U)(type: rnaLinking) C9 H15 N2 O9 P Link out to Ligand Expos:H2U Link out to SuperLigands:H2U Link out to SuperHapten:H2U 2D
    M2G N2-DIMETHYLGUANOSINE-5'-MONOPHOSPHATE (parent: G)(type: rnaLinking) C12 H18 N5 O8 P Link out to Ligand Expos:M2G Link out to SuperLigands:M2G Link out to SuperHapten:M2G 2D
    OMC O2'-METHYLYCYTIDINE-5'-MONOPHOSPHATE (parent: C)(type: rnaLinking) C10 H16 N3 O8 P Link out to Ligand Expos:OMC Link out to SuperLigands:OMC Link out to SuperHapten:OMC 2D
    OMG O2'-METHYLGUANOSINE-5'-MONOPHOSPHATE (parent: G)(type: rnaLinking) C11 H16 N5 O8 P Link out to Ligand Expos:OMG Link out to SuperLigands:OMG Link out to SuperHapten:OMG 2D
    YG WYBUTOSINE (parent: G)(type: rnaLinking) C21 H29 N6 O12 P Link out to Ligand Expos:YG Link out to SuperLigands:YG Link out to SuperHapten:YG 2D
    PSU PSEUDOURIDINE-5'-MONOPHOSPHATE (parent: U)(type: rnaLinking) C9 H13 N2 O9 P Link out to Ligand Expos:PSU Link out to SuperLigands:PSU Link out to SuperHapten:PSU 2D
    5MC 5-METHYLCYTIDINE-5'-MONOPHOSPHATE (parent: C)(type: rnaLinking) C10 H16 N3 O8 P Link out to Ligand Expos:5MC Link out to SuperLigands:5MC Link out to SuperHapten:5MC 2D
    7MG 7N-METHYL-8-HYDROGUANOSINE-5'-MONOPHOSPHATE (parent: G)(type: rnaLinking) C11 H18 N5 O8 P Link out to Ligand Expos:7MG Link out to SuperLigands:7MG Link out to SuperHapten:7MG 2D
    5MU 5-METHYLURIDINE 5'-MONOPHOSPHATE (parent: U)(type: rnaLinking) C10 H15 N2 O9 P Link out to Ligand Expos:5MU Link out to SuperLigands:5MU Link out to SuperHapten:5MU 2D
    1MA 6-HYDRO-1-METHYLADENOSINE-5'-MONOPHOSPHATE (parent: A)(type: rnaLinking) C11 H18 N5 O7 P Link out to Ligand Expos:1MA Link out to SuperLigands:1MA Link out to SuperHapten:1MA 2D
     
     
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  •  
    Move Section Deposition Summary Hide
    Authors:   Sussman, J.L.,   Holbrook, S.R.,   Warrant, R.W.,   Church, G.M.,   Kim, S.-H.

    Deposition:   1978-11-16
    Release:   1978-11-16
    Last Modified (REVDAT):   2009-02-24

    Previous versions: 5TNA
     
     
  •  
    Move Section Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Experimental Data:   N/A
    View a histogram of Resolution Resolution[Å]: 2.70
    R-Value: 0.198 (obs.)
    R-Free: n/a
    Space Group: P 21 2 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 33.00 α = 90.00 
    b = 56.00 β = 90.00 
    c = 161.00 γ = 90.00