HIV Integrase core domain in complex with inhibitor
Gorman, M.A., Parker, M.W.To be published.
Experimental Data Snapshot
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Integrase | 165 | Human immunodeficiency virus 1 | Mutation(s): 4  Gene Names: pol | ||
UniProt | |||||
Find proteins for P12497 (Human immunodeficiency virus type 1 group M subtype B (isolate NY5)) Explore P12497  Go to UniProtKB:  P12497 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P12497 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
S0Y (Subject of Investigation/LOI) Query on S0Y | B [auth A] | 2-(2-ethynyl-5-methyl-1-benzofuran-3-yl)ethanoic acid C13 H10 O3 AXEQPNQJJUVTJZ-UHFFFAOYSA-N | |||
IOD Query on IOD | D [auth A], E [auth A], F [auth A], G [auth A], H [auth A] | IODIDE ION I XMBWDFGMSWQBCA-UHFFFAOYSA-M | |||
SO4 Query on SO4 | C [auth A] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |
Modified Residues 2 Unique | |||||
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ID | Chains | Type | Formula | 2D Diagram | Parent |
CSD Query on CSD | A | L-PEPTIDE LINKING | C3 H7 N O4 S | CYS | |
CSO Query on CSO | A | L-PEPTIDE LINKING | C3 H7 N O3 S | CYS |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 46.029 | α = 90 |
b = 46.029 | β = 90 |
c = 139.457 | γ = 90 |
Software Name | Purpose |
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REFMAC | refinement |
Aimless | data reduction |
Aimless | data scaling |
PHASER | phasing |