Download MendeleyThe crystal structure of 4-amino-4-deoxychorismate lyase from Salmonella typhimurium LT2
Tan, K., Makowska-Grzyska, M., Nocek, B., Joachimiak, A.To be published.
6BB9
The crystal structure of 4-amino-4-deoxychorismate lyase from Salmonella typhimurium LT2
- PDB DOI: https://doi.org/10.2210/pdb6BB9/pdb
- Classification: LYASE
- Organism(s): Salmonella enterica subsp. enterica serovar Typhimurium
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2017-10-17 Released: 2017-10-25
- Funding Organization(s): National Institutes of Health
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.28 Å
- R-Value Free: 0.227
- R-Value Work: 0.190
- R-Value Observed: 0.191
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| 4-amino-4-deoxychorismate lyase | 272 | Salmonella enterica subsp. enterica serovar Typhimurium | Mutation(s): 0 Gene Names: pabC, DD95_12385, STMU2UK_01164 EC: 4.1.3.38 |  | |
UniProt | |||||
Find proteins for Q7CQR1 (Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)) Explore Q7CQR1 Go to UniProtKB: Q7CQR1 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q7CQR1 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 4 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| MES Query on MES | C [auth A], D [auth A], H [auth B], I [auth B] | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID C6 H13 N O4 S SXGZJKUKBWWHRA-UHFFFAOYSA-N |  | ||
| SO4 Query on SO4 | E [auth A], K [auth B], L [auth B] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |  | ||
| EDO Query on EDO | J [auth B] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |  | ||
| CL Query on CL | F [auth A], G [auth A], M [auth B] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.28 Å
- R-Value Free: 0.227
- R-Value Work: 0.190
- R-Value Observed: 0.191
- Space Group: P 61 2 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 87.25 | α = 90 |
| b = 87.25 | β = 90 |
| c = 308.949 | γ = 120 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| HKL-3000 | data reduction |
| HKL-3000 | data scaling |
| HKL-3000 | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2017-10-25 Deposition Author(s): Tan, K., Makowska-Grzyska, M., Nocek, B., Joachimiak, A., Center for Structural Genomics of Infectious Diseases (CSGID)
| Funding Organization | Location | Grant Number |
|---|---|---|
| National Institutes of Health | United States | HHSN272201700060C |
Revision History (Full details and data files)
- Version 1.0: 2017-10-25
Type: Initial release - Version 1.1: 2017-12-06
Changes: Author supporting evidence - Version 1.2: 2023-10-04
Changes: Data collection, Database references, Refinement description
