6B0Q

Zinc finger Domain of WT1(-KTS form) with 13+1mer Oligonucleotide with 3' Triplet TGT


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.79 Å
  • R-Value Free: 0.241
  • R-Value Work: 0.225

Literature

Macromolecules
Sequence Display for 6B0Q

Classification: Transcription / DNA

Total Structure Weight: 47668.79


Macromolecule Entities
Molecule Chains Length Organism Details
Wilms tumor protein A, D 119 Homo sapiens Gene Name(s): WT1 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(P*GP*CP*GP*TP*GP*GP*GP*AP*GP*TP*GP*TP*T)-3') B, E 14 Homo sapiens
DNA (5'-D(P*AP*AP*CP*AP*CP*TP*CP*CP*CP*AP*CP*GP*C)-3') C, F 14 Homo sapiens

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A, D SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

A, D ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.79 Å
  • R-Value Free: 0.241
  • R-Value Work: 0.225
  • Space Group: P 63

Unit Cell:

Length (Å) Angle (°)
a = 161.66 α = 90.00
b = 161.66 β = 90.00
c = 42.17 γ = 120.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2017-09-14
  • Released Date: 2018-01-03
  • Deposition author(s): Horton, J.R., Cheng, X.

Revision History

  • Version 1_0: 2018-01-03

    Type: Initial release

  • Version 1_1: 2018-01-17

    Type: Database references