5ELS

Structure of the KH domain of T-STAR in complex with AAAUAA RNA


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.87 Å
  • R-Value Free: 0.236
  • R-Value Work: 0.188

Literature

Macromolecules
Sequence Display for 5ELS

Classification: RNA BINDING PROTEIN

Total Structure Weight: 81191.06


Macromolecule Entities
Molecule Chains Length Organism Details
KH domain-containing, RNA-binding, signal transduction-associated protein 3 A, B, C..., D, E, FA, B, C, D, E, F 113 Homo sapiens Fragment: RNA binding protein, UNP residues 50-160
Details: N-terminus GA residues from tag.
Gene Name(s): KHDRBS3 Gene View SALP SLM2
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
RNA (5'-R(P*AP*AP*AP*UP*AP*A)-3') H, I 6 Synthetic construct

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A, B SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.87 Å
  • R-Value Free: 0.236
  • R-Value Work: 0.188
  • Space Group: C 2 2 21

Unit Cell:

Length (Å) Angle (°)
a = 93.73 α = 90.00
b = 162.22 β = 90.00
c = 113.04 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2015-11-05
  • Released Date: 2016-01-13
  • Deposition author(s): Dominguez, C., Feracci, M.

Revision History

  • 2016-01-27
    Type: Database references