5XZB

Mouse cGAS bound to the inhibitor RU365


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.13 Å
  • R-Value Free: 0.248
  • R-Value Work: 0.213

Literature

Macromolecules
Sequence Display for 5XZB

Classification: IMMUNE SYSTEM / INHIBITOR

Total Structure Weight: 51256.06


Macromolecule Entities
Molecule Chains Length Organism Details
Cyclic GMP-AMP synthase A 357 Mus musculus EC#: 2.7.7.86 IUBMB
Fragment: UNP residues 149-505
Gene Name(s): Mb21d1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(*AP*AP*AP*TP*TP*GP*CP*CP*GP*AP*AP*GP*AP*CP*G)-3') E 15 Mus musculus
DNA (5'-D(P*CP*GP*TP*CP*TP*TP*CP*GP*GP*CP*AP*AP*TP*T)-3') F 14 Mus musculus

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
A9Y
Query on A9Y

A (3R)-3-[1-(1H-benzimidazol-2-yl)-5-hydroxy- 3-methyl-1H-pyrazol-4-yl]-2-benzofuran-1(3H)- one
C19 H14 N4 O3
JRMYHMGBFVARON-MRXNPFEDSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

A ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.13 Å
  • R-Value Free: 0.248
  • R-Value Work: 0.213
  • Space Group: I 2 2 2

Unit Cell:

Length (Å) Angle (°)
a = 85.50 α = 90.00
b = 98.84 β = 90.00
c = 130.20 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2017-07-12
  • Released Date: 2017-08-09
  • Deposition author(s): Vincent, J., Adura, C., Gao, P., Luz, A., Lama, L., Asano, Y., Okamoto, R., Imaeda, T., Aida, J., Rothamel, K., Gogakos, T., Steinberg, J., Reasoner, S., Aso, K., Tuschl, T., Patel, D.J., Glickman, J.F., Ascano, M.

Revision History

No revisions since initial release