5XVP

E. fae Cas1-Cas2/prespacer/target ternary complex revealing the fully integrated states


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Free: 0.233
  • R-Value Work: 0.194

Literature

Macromolecules
Sequence Display for 5XVP

Classification: IMMUNE SYSTEM

Total Structure Weight: 210341.58


Macromolecule Entities
Molecule Chains Length Organism Details
CRISPR-associated endonuclease Cas1 A, B, C, D 288 Enterococcus faecalis EC#: 3.1 IUBMB
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
CRISPR-associated endoribonuclease Cas2 E, F 109 Enterococcus faecalis EC#: 3.1 IUBMB
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
DNA (73-MER) G 73 Enterococcus faecalis DNA
DNA (73-MER) H 73 Enterococcus faecalis DNA
DNA (5'-D(P*TP*TP*CP*TP*CP*CP*GP*AP*G)-3') I, J 9 Enterococcus faecalis DNA

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MG
Query on MG

E, F MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Free: 0.233
  • R-Value Work: 0.194
  • Space Group: I 2 2 2

Unit Cell:

Length (Å) Angle (°)
a = 64.87 α = 90.00
b = 212.29 β = 90.00
c = 512.20 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2017-06-28
  • Released Date: 2017-10-04
  • Deposition author(s): Xiao, Y., Ng, S., Nam, K.H., Ke, A.

Revision History

  • Version 1_0: 2017-10-04

    Type: Initial release

  • Version 1_1: 2017-10-18

    Type: Author supporting evidence, Database references