5WWS

Crystal structure of human NSun6/tRNA/SAM


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.25 Å
  • R-Value Free: 0.222
  • R-Value Work: 0.193

Literature

Macromolecules
Sequence Display for 5WWS

Classification: TRANSFERASE / RNA

Total Structure Weight: 154954.06


Macromolecule Entities
Molecule Chains Length Organism Details
Putative methyltransferase NSUN6 A, B 477 Homo sapiens EC#: 2.1.1 IUBMB
Gene Name(s): NSUN6 Gene View NOPD1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
tRNA C, D 75 Homo sapiens

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SAM
Query on SAM

A, B S-ADENOSYLMETHIONINE
C15 H22 N6 O5 S
MEFKEPWMEQBLKI-FCKMPRQPSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.25 Å
  • R-Value Free: 0.222
  • R-Value Work: 0.193
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 205.24 α = 90.00
b = 170.26 β = 108.63
c = 76.88 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2017-01-04
  • Released Date: 2017-06-28
  • Deposition author(s): Liu, R.J., Long, T., Wang, E.D.

Revision History

No revisions since initial release