5WSQ

Crystal structure of C-Hg-T pair containing DNA duplex

Structural Biology Knowledgebase: 5WSQ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.05 Å
  • R-Value Free: 0.175
  • R-Value Work: 0.155

Literature

Macromolecules
Sequence Display for 5WSQ

Classification: DNA

Total Structure Weight: 5284.43

Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(*GP*CP*CP*CP*GP*TP*GP*C)-3') A, B 8 Unidentified

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
HG
Query on HG

A, B MERCURY (II) ION
Hg
BQPIGGFYSBELGY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PDO
Query on PDO

B 1,3-PROPANDIOL
C3 H8 O2
YPFDHNVEDLHUCE-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.05 Å
  • R-Value Free: 0.175
  • R-Value Work: 0.155
  • Space Group: P 21 21 2

Unit Cell:

Length (Å) Angle (°)
a = 37.85 α = 90.00
b = 51.14 β = 90.00
c = 21.59 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2016-12-08
  • Released Date: 2017-02-08
  • Deposition author(s): Gan, J.H., Liu, H.H.

Revision History

No revisions since initial release