5W8W

Bacillus cereus Zn-dependent metallo-beta-lactamase at pH 7 - new refinement


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.25 Å
  • R-Value Free: 0.219
  • R-Value Work: 0.153

Literature

Macromolecules
Sequence Display for 5W8W

Classification: HYDROLASE

Total Structure Weight: 24649.78

Macromolecule Entities
Molecule Chains Length Organism Details
Metallo-beta-lactamase type 2 A 222 Bacillus cereus EC#: 3.5.2.6 IUBMB
Fragment: residues 36-257
Gene Name(s): blm
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

A ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
UNX
Query on UNX

A UNKNOWN ATOM OR ION
X
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.25 Å
  • R-Value Free: 0.219
  • R-Value Work: 0.153
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 53.60 α = 90.00
b = 60.42 β = 93.28
c = 69.51 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2017-06-22
  • Released Date: 2017-07-12
  • Deposition author(s): Gonzalez, J.M., Shabalin, I.G., Raczynska, J.E., Jaskolski, M., Minor, W., Wlodawer, A., Gonzalez, M.M., Vila, A.J.
  • This entry supercedes: 4NQ7

Revision History

  • Version 1_0: 2017-07-12

    Type: Initial release