5TT6

T4 RNA Ligase 1 (K99M)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.19 Å
  • R-Value Free: 0.259
  • R-Value Work: 0.189

Literature

Macromolecules
Sequence Display for 5TT6

Classification: LIGASE

Total Structure Weight: 46596.70

Macromolecule Entities
Molecule Chains Length Organism Details
T4 RNA ligase 1 A 394 Escherichia virus t4 EC#: 6.5.1.3 IUBMB
Mutation: K99M
Gene Name(s): 63
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ATP
Query on ATP

A ADENOSINE-5'-TRIPHOSPHATE
C10 H16 N5 O13 P3
ZKHQWZAMYRWXGA-KQYNXXCUSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.19 Å
  • R-Value Free: 0.259
  • R-Value Work: 0.189
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 107.29 α = 90.00
b = 39.96 β = 116.36
c = 108.27 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2016-11-01
  • Released Date: 2017-03-08
  • Deposition author(s): Goldgur, Y., Unciuleac, M.-C., Shuman, S.H.

Revision History

  • Version 1_0: 2017-03-08

    Type: Initial release

  • Version 1_1: 2017-03-22

    Type: Database references