5THG

Engineered variant of I-OnuI meganuclease targeting the HIV CCR5 gene; harbors 43 point mutations relative to wild-type I-OnuI


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.11 Å
  • R-Value Free: 0.279
  • R-Value Work: 0.221

Literature

Macromolecules
Sequence Display for 5THG

Classification: HYDROLASE / DNA

Total Structure Weight: 106294.70


Macromolecule Entities
Molecule Chains Length Organism Details
I-OnuI_e-hCCR5 A, D 304 Synthetic construct
Macromolecule Entities
Molecule Chains Length Organism Details
DNA (29-MER) B, E 29 Synthetic construct
DNA (29-MER) C, F 29 Synthetic construct

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GOL
Query on GOL

B, E GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

A, D CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.11 Å
  • R-Value Free: 0.279
  • R-Value Work: 0.221
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 75.96 α = 90.00
b = 112.35 β = 90.00
c = 122.88 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2016-09-29
  • Released Date: 2017-05-03
  • Deposition author(s): Hallinan, J.P., Stoddard, B.L.

Revision History

No revisions since initial release