5NEW

RNA-RNA base stacking in the crystal structure of an Hfq6:RNA dimer


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.51 Å
  • R-Value Free: 0.252
  • R-Value Work: 0.196

Literature

Macromolecules
Sequence Display for 5NEW

Classification: RNA

Total Structure Weight: 25336.67


Macromolecule Entities
Molecule Chains Length Organism Details
RNA-binding protein Hfq A, B 102 Escherichia coli Gene Name(s): hfq ECS88_4758
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
RNA (5'-R(P*AP*AP*AP*AP*AP*A)-3') H 6 Escherichia coli
RNA (5'-R(P*UP*U)-3') C 2 Escherichia coli

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A, B SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.51 Å
  • R-Value Free: 0.252
  • R-Value Work: 0.196
  • Space Group: H 3 2

Unit Cell:

Length (Å) Angle (°)
a = 66.88 α = 90.00
b = 66.88 β = 90.00
c = 227.72 γ = 120.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2017-03-12
  • Released Date: 2017-10-04
  • Deposition author(s): Schulz, E.C., Barabas, O.

Revision History

  • Version 1_0: 2017-10-04

    Type: Initial release