5ML7

CRYSTAL STRUCTURE OF L1-STALK FRAGMENT OF 23S rRNA FROM HALOARCULA MARISMORTUI


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.3 Å
  • R-Value Free: 0.291
  • R-Value Work: 0.226

Literature

Macromolecules
Sequence Display for 5ML7

Classification: RNA

Total Structure Weight: 62241.60

Macromolecule Entities
Molecule Chains Length Organism Details
23S ribosomal RNA A, B 96 Haloarcula marismortui

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CA
Query on CA

A CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A, B MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.3 Å
  • R-Value Free: 0.291
  • R-Value Work: 0.226
  • Space Group: P 41 21 2

Unit Cell:

Length (Å) Angle (°)
a = 136.84 α = 90.00
b = 136.84 β = 90.00
c = 70.11 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 2016-12-06
  • Released Date: 2017-12-20
  • Deposition author(s): Gabdulkhakov, A.G., Tishchenko, T.V., Nevskaya, N.A., Nikonov, S.V.

Revision History

  • Version 1_0: 2017-12-20

    Type: Initial release