5LR3

RNA duplex has central consecutive GA pairs flanked by G-U basepairs


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.65 Å
  • R-Value Free: 0.266
  • R-Value Work: 0.247

Literature

Macromolecules
Sequence Display for 5LR3

Classification: RNA

Total Structure Weight: 6717.83

Macromolecule Entities
Molecule Chains Length Organism Details
RNA (5'-R(*GP*(CBV)P*CP*GP*GP*AP*UP*GP*GP*C)-3') A, B 10 Homo sapiens

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

B SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
CBV
Query on CBV
A, B RNA LINKING C9 H13 Br N3 O8 P C

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.65 Å
  • R-Value Free: 0.266
  • R-Value Work: 0.247
  • Space Group: P 43 21 2

Unit Cell:

Length (Å) Angle (°)
a = 33.30 α = 90.00
b = 33.30 β = 90.00
c = 120.91 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2016-08-18
  • Released Date: 2017-06-21
  • Deposition author(s): Huang, L., Lilley, D.M.J.

Revision History

  • 2017-06-28
    Type: Database references
  • 2017-09-13
    Type: Database references