5L2L

Nab2 Zn fingers 5-7 bound to A11G RNA


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.55 Å
  • R-Value Free: 0.152
  • R-Value Work: 0.131

Literature

Macromolecules
Sequence Display for 5L2L

Classification: RNA BINDING PROTEIN

Total Structure Weight: 52443.64


Macromolecule Entities
Molecule Chains Length Organism Details
Nab2p A, B, E, F 77 Saccharomyces cerevisiae Mutation: P407G, V408S
Gene Name(s): NAB2 Gene View YGL122C
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
RNA (5'-R(*AP*AP*AP*AP*AP*AP*AP*AP*AP*G)-3') C, D, G, H 12 Saccharomyces cerevisiae

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

A, B, E, F ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.55 Å
  • R-Value Free: 0.152
  • R-Value Work: 0.131
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 46.67 α = 90.00
b = 85.04 β = 99.07
c = 64.96 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2016-08-02
  • Released Date: 2016-12-21
  • Deposition author(s): Stewart, M., Aibara, S.

Revision History

  • Version 1_0: 2016-12-21

    Type: Initial release

  • Version 1_1: 2017-06-14

    Type: Database references