5JO2

Crystal structure of abscisic acid-bound abscisic acid receptor PYL3 in complex with type 2C protein phosphatase HAB1


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.42 Å
  • R-Value Free: 0.255
  • R-Value Work: 0.209

Literature

Macromolecules
Sequence Display for 5JO2

Classification: SIGNALING PROTEIN / Hydrolase

Total Structure Weight: 58047.97

Macromolecule Entities
Molecule Chains Length Organism Details
Abscisic acid receptor PYL3 A 182 Arabidopsis thaliana Fragment: UNP residues 24-205
Gene Name(s): PYL3 RCAR13 At1g73000 F3N23.20
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Protein phosphatase 2C 16 B 335 Arabidopsis thaliana EC#: 3.1.3.16 IUBMB
Fragment: UNP residues 172-506
Gene Name(s): HAB1 P2C-HA At1g72770 F28P22.4
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
A8S
Query on A8S

A (2Z,4E)-5-[(1S)-1-hydroxy-2,6,6-trimethyl- 4-oxocyclohex-2-en-1-yl]-3-methylpenta-2,4- dienoic acid
6,, (2Z (Synonym)
C15 H20 O4
JLIDBLDQVAYHNE-YKALOCIXSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

B MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.42 Å
  • R-Value Free: 0.255
  • R-Value Work: 0.209
  • Space Group: P 21 2 21

Unit Cell:

Length (Å) Angle (°)
a = 45.33 α = 90.00
b = 75.31 β = 90.00
c = 169.20 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2016-05-01
  • Released Date: 2016-09-07
  • Deposition author(s): Weng, J.K., Noel, J.P.

Revision History

  • Version 1_0: 2016-09-07

    Type: Initial release

  • Version 1_1: 2017-09-27

    Type: Advisory, Author supporting evidence, Derived calculations