5JO1

Crystal structure of phaseic acid-bound abscisic acid receptor PYL3 in complex with type 2C protein phosphatase HAB1


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.250
  • R-Value Work: 0.209

Literature

Macromolecules
Sequence Display for 5JO1

Classification: SIGNALING PROTEIN / Hydrolase

Total Structure Weight: 58348.27

Macromolecule Entities
Molecule Chains Length Organism Details
Protein phosphatase 2C 16 B 335 Arabidopsis thaliana EC#: 3.1.3.16 IUBMB
Fragment: UNP residues 172-506
Gene Name(s): HAB1 P2C-HA At1g72770 F28P22.4
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Abscisic acid receptor PYL3 A 185 Arabidopsis thaliana Fragment: UNP residues 24-205
Gene Name(s): PYL3 RCAR13 At1g73000 F3N23.20
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
6LM
Query on 6LM

A (3S,4E)-5-[(1R,5R,8S)-8-hydroxy-1,5-dimethyl- 3-oxo-6-oxabicyclo[3.2.1]octan-8-yl]-3-methylpent- 4-enoic acid
C15 H22 O5
GUHARHDZDIMRCB-UXXKCKHWSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

B MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.250
  • R-Value Work: 0.209
  • Space Group: P 21 2 21

Unit Cell:

Length (Å) Angle (°)
a = 45.63 α = 90.00
b = 75.45 β = 90.00
c = 168.60 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2016-05-01
  • Released Date: 2016-09-07
  • Deposition author(s): Weng, J.K., Noel, J.P.

Revision History

No revisions since initial release