5JH0

Crystal structure of the mitochondrial DNA packaging protein Abf2p in complex with DNA at 2.18 Angstrom resolution


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.18 Å
  • R-Value Free: 0.236
  • R-Value Work: 0.209

Literature

Macromolecules
Sequence Display for 5JH0

Classification: DNA BINDING PROTEIN

Total Structure Weight: 65958.30


Macromolecule Entities
Molecule Chains Length Organism Details
ARS-binding factor 2, mitochondrial A, D 163 Saccharomyces cerevisiae Fragment: UNP residues 27-183
Details: Yeast mitochondrial DNA packaging protein
Gene Name(s): ABF2 HIM1 YMR072W YM9916.11
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(*AP*AP*TP*AP*AP*TP*AP*AP*AP*TP*TP*AP*TP*AP*TP*AP*AP*TP*AP*TP*AP*A)-3') B, E 22 Saccharomyces cerevisiae
DNA (5'-D(*TP*TP*AP*TP*AP*TP*TP*AP*TP*AP*TP*AP*AP*TP*TP*TP*AP*TP*TP*AP*TP*T)-3') C, F 22 Saccharomyces cerevisiae DNA


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.18 Å
  • R-Value Free: 0.236
  • R-Value Work: 0.209
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 88.49 α = 90.00
b = 113.41 β = 103.80
c = 67.71 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2016-04-20
  • Released Date: 2017-02-08
  • Deposition author(s): Chakraborty, A., Lyonnais, S., Sola, M.

Revision History

No revisions since initial release