5IYT

Complex structure of EV-B93 main protease 3C with N-Ethyl 4-((1-cycloheptyl-1,2-dihydropyrazol-3-one-5-yl)-amino)-4-oxo-2Z-butenamide


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.73 Å
  • R-Value Free: 0.217
  • R-Value Work: 0.187

Literature

Macromolecules
Sequence Display for 5IYT

Classification: HYDROLASE

Total Structure Weight: 43113.43

Macromolecule Entities
Molecule Chains Length Organism Details
EV-B93 main protease 3C A, B 191 Enterovirus b EC#: 3.4.22.28 IUBMB 3.4.22.29 IUBMB 3.6.1.15 IUBMB
Mutation: A95V, M137V
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NZN
Query on NZN

B N-Ethyl 4-((1-cycloheptyl-1,2-dihydropyrazol- 3-one-5-yl)-amino)-4-oxo-butanamide
C16 H26 N4 O3
LPNCMHPJRSJOIM-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.73 Å
  • R-Value Free: 0.217
  • R-Value Work: 0.187
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 57.46 α = 90.00
b = 52.33 β = 103.73
c = 62.27 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2016-03-24
  • Released Date: 2016-10-05
  • Deposition author(s): Kaczmarska, Z., Becker, D., Rademann, J., Coll, M.

Revision History

  • 2016-10-12
    Type: Database references