5IXP

Crystal structure of Extracellular solute-binding protein family 1

Structural Biology Knowledgebase: 5IXP SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.73 Å
  • R-Value Free: 0.171
  • R-Value Work: 0.130

Literature

Macromolecules
Sequence Display for 5IXP

Classification: TRANSPORT PROTEIN

Total Structure Weight: 43974.18

Macromolecule Entities
Molecule Chains Length Organism Details
Extracellular solute-binding protein family 1 A 393 Kribbella flavida Gene Name(s): Kfla_2403
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FMT
Query on FMT

A FORMIC ACID
C H2 O2
BDAGIHXWWSANSR-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.73 Å
  • R-Value Free: 0.171
  • R-Value Work: 0.130
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 89.97 α = 90.00
b = 115.18 β = 131.17
c = 59.98 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2016-03-23
  • Released Date: 2016-03-30
  • Deposition author(s): Chang, C., Cuff, M., Chhor, G., Endres, M., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

Revision History

  • 2016-08-17
    Type: Function and keywords | Details: Function and keywords