5IP3

Tomato spotted wilt tospovirus nucleocapsid protein-ssDNA complex


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Free: 0.291
  • R-Value Work: 0.250

Literature

Macromolecules
Sequence Display for 5IP3

Classification: Viral protein / DNA

Total Structure Weight: 99848.14


Macromolecule Entities
Molecule Chains Length Organism Details
Nucleoprotein A, B, C 279 Tomato spotted wilt orthotospovirus Gene Name(s): N
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(P*TP*TP*TP*TP*T)-3') D 5 Synthetic construct
DNA (5'-D(P*TP*TP*TP*TP*TP*TP*T)-3') E 7 Synthetic construct
DNA (5'-D(P*TP*TP*TP*TP*TP*T)-3') F 6 Synthetic construct


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Free: 0.291
  • R-Value Work: 0.250
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 68.94 α = 90.00
b = 86.46 β = 112.10
c = 66.32 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2016-03-09
  • Released Date: 2017-03-22
  • Deposition author(s): Komoda, K., Narita, M., Yamashita, K., Tanaka, I., Yao, M.

Revision History

  • 2017-06-14
    Type: Advisory, Atomic model, Data collection, Database references, Derived calculations, Polymer sequence