5IA1

Crystal Structure of Ephrin A2 (EphA2) Receptor Protein Kinase with MLN8054

Structural Biology Knowledgebase: 5IA1 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.04 Å
  • R-Value Free: 0.223
  • R-Value Work: 0.181

Literature

Macromolecules
Sequence Display for 5IA1

Classification: TRANSFERASE

Total Structure Weight: 35001.77

Macromolecule Entities
Molecule Chains Length Organism Details
Ephrin type-A receptor 2 A 306 Homo sapiens EC#: 2.7.10.1 IUBMB
Fragment: UNP residues 596-900
Gene Name(s): EPHA2 Gene View ECK
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZZL
Query on ZZL

A 4-{[9-CHLORO-7-(2,6-DIFLUOROPHENYL)-5H-PYRIMIDO[5,4- D][2]BENZAZEPIN-2-YL]AMINO}BENZOIC ACID
C25 H15 Cl F2 N4 O2
HHFBDROWDBDFBR-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
EDO
Query on EDO

A 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.04 Å
  • R-Value Free: 0.223
  • R-Value Work: 0.181
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 32.71 α = 90.00
b = 106.74 β = 108.79
c = 40.73 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2016-02-21
  • Released Date: 2016-11-09
  • Deposition author(s): KUDLINZKI, D., LINHARD, V.L., GANDE, S.L., SREERAMULU, S., SAXENA, K., HEINZLMEIR, S., MEDARD, G., KUESTER, B., SCHWALBE, H.

Revision History

  • 2016-12-28
    Type: Citation | Details: Citation