5I4S

Non-natural DNA pair Z (6-amino-5-nitro-2[1H] pyridone heterocycle)-Guanosine


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.46 Å
  • R-Value Free: 0.268
  • R-Value Work: 0.206

Literature

Macromolecules
Sequence Display for 5I4S

Classification: DNA

Total Structure Weight: 7735.43

Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(P*GP*CP*GP*AP*AP*TP*TP*(D8Z)P*GP*CP*G)-3') A, B 12 Unidentified

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CA
Query on CA

A, B CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
1W5
Query on 1W5
A, B DNA linking C10 H14 N3 O9 P --

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.46 Å
  • R-Value Free: 0.268
  • R-Value Work: 0.206
  • Space Group: H 3

Unit Cell:

Length (Å) Angle (°)
a = 41.49 α = 90.00
b = 41.49 β = 90.00
c = 101.74 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2016-02-12
  • Released Date: 2017-02-22
  • Deposition author(s): Ahmad Sobri, A.F., Brady, R.L.

Revision History

  • Version 1_0: 2017-02-22

    Type: Initial release