5F4B

Structure of B. abortus WrbA-related protein A (WrpA)

Structural Biology Knowledgebase: 5F4B SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.269
  • R-Value Work: 0.230

Literature

Macromolecules
Sequence Display for 5F4B

Classification: OXIDOREDUCTASE

Total Structure Weight: 44458.99

Macromolecule Entities
Molecule Chains Length Organism Details
NAD(P)H dehydrogenase (quinone) A, B 202 Brucella abortus EC#: 1.6.5.2 IUBMB
Gene Name(s): BAB1_1070
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FMN
Query on FMN

A, B FLAVIN MONONUCLEOTIDE
RIBOFLAVIN MONOPHOSPHATE (Synonym)
C17 H21 N4 O9 P
FVTCRASFADXXNN-SCRDCRAPSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CL
Query on CL

A, B CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

Unit Cell:

Length (Å) Angle (°)
a = 63.58 α = 90.00
b = 63.58 β = 90.00
c = 188.54 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2015-12-03
  • Released Date: 2016-03-09
  • Deposition author(s): Herrou, J., Czyz, D., Willett, J.W., Kim, H.S., Chhor, G., Endres, M., Babnigg, G., Kim, Y., Joachimiak, A., Crosson, S., Midwest Center for Structural Genomics (MCSG)

Revision History

  • 2016-04-20
    Type: Citation | Details: Citation