5ENI

Crystal structure of the second bromodomain of Pleckstrin homology domain interacting protein (PHIP) in complex with compound-13 N11537 (SGC - Diamond I04-1 fragment screening)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.69 Å
  • R-Value Free: 0.265
  • R-Value Work: 0.217

Literature

Macromolecules
Sequence Display for 5ENI

Classification: SIGNALING PROTEIN

Total Structure Weight: 15828.74

Macromolecule Entities
Molecule Chains Length Organism Details
PH-interacting protein A 131 Homo sapiens Fragment: Bromodomain, UNP residues 1315-1440
Gene Name(s): PHIP Gene View WDR11 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
5QA
Query on 5QA

A ~{N}-[[2,6-bis(chloranyl)phenyl]methyl]-2- oxidanyl-ethanamide
C9 H9 Cl2 N O2
OANNQEVHRXLEDB-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.69 Å
  • R-Value Free: 0.265
  • R-Value Work: 0.217
  • Space Group: P 21 21 2

Unit Cell:

Length (Å) Angle (°)
a = 60.17 α = 90.00
b = 91.40 β = 90.00
c = 23.99 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2015-11-09
  • Released Date: 2016-04-27
  • Deposition author(s): Krojer, T., Talon, R., Collins, P., Bradley, A., Cox, O., Szykowska, A., Burgess-Brown, N., Brennan, P., Bountra, C., Arrowsmith, C.H., Edwards, A., von Delft, F., Structural Genomics Consortium (SGC)

Revision History

  • Version 1_0: 2016-04-27

    Type: Initial release