5CZ2

Crystal structure of a two-domain fragment of MMTV integrase


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.72 Å
  • R-Value Free: 0.280
  • R-Value Work: 0.241

Literature

Macromolecules
Sequence Display for 5CZ2

Classification: HYDROLASE

Total Structure Weight: 286955.75

Macromolecule Entities
Molecule Chains Length Organism Details
Pol polyprotein A, B, C..., D, E, F, G, H, I, J, K, LA, B, C, D, E, F, G, H, I, J, K, L 210 Mouse mammary tumor virus EC#: 2.7.7 IUBMB 2.7.7.49 IUBMB 2.7.7.7 IUBMB 3.1 IUBMB 3.1.26.4 IUBMB
Fragment: UNP residues 1437-1646
Gene Name(s): pol
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZN
Query on ZN

G, H, I, J, K, L ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A, B, C, D, E, F MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.72 Å
  • R-Value Free: 0.280
  • R-Value Work: 0.241
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 54.37 α = 90.00
b = 83.15 β = 90.19
c = 141.14 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2015-07-31
  • Released Date: 2016-02-17
  • Deposition author(s): Cook, N., Ballandras-Colas, A., Engelman, A., Cherepanov, P.

Revision History

  • Version 1_0: 2016-02-17

    Type: Initial release

  • Version 1_1: 2016-02-24

    Type: Database references

  • Version 1_2: 2016-03-02

    Type: Database references