5BXG

Crystal structure of an uncharacterized beta-sandwich protein (CD630_09570) from Clostridium difficile 630 at 1.90 A resolution

Structural Biology Knowledgebase: 5BXG SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.189
  • R-Value Work: 0.165

Literature

Macromolecules
Sequence Display for 5BXG

Classification: UNKNOWN FUNCTION

Total Structure Weight: 18762.58

Macromolecule Entities
Molecule Chains Length Organism Details
uncharacterized beta-sandwich protein A 162 Clostridioides difficile Gene Name(s): CD630_09570 CD630_29070
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
EDO
Query on EDO

A 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

Unit Cell:

Length (Å) Angle (°)
a = 69.11 α = 90.00
b = 69.11 β = 90.00
c = 87.80 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2015-06-08
  • Released Date: 2015-07-08
  • Deposition author(s): Joint Center for Structural Genomics (JCSG)

Revision History

No revisions since initial release