5BU9

Crystal structure of Beta-N-acetylhexosaminidase from Beutenbergia cavernae DSM 12333

Structural Biology Knowledgebase: 5BU9 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.26 Å
  • R-Value Free: 0.198
  • R-Value Work: 0.158

Literature

Macromolecules
Sequence Display for 5BU9

Classification: HYDROLASE

Total Structure Weight: 69510.93

Macromolecule Entities
Molecule Chains Length Organism Details
Beta-N-acetylhexosaminidase A, B 340 Beutenbergia cavernae EC#: 3.2.1.52 IUBMB
Gene Name(s): Bcav_3777
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GOL
Query on GOL

A, B GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.26 Å
  • R-Value Free: 0.198
  • R-Value Work: 0.158
  • Space Group: P 31 2 1

Unit Cell:

Length (Å) Angle (°)
a = 146.51 α = 90.00
b = 146.51 β = 90.00
c = 85.49 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2015-06-03
  • Released Date: 2015-06-17
  • Deposition author(s): Chang, C., Tan, K., Li, H., Endres, M., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

Revision History

No revisions since initial release