Download MendeleyINVESTIGATING THE CONFORMATIONAL CHANGES of SORCIN TO SHED LIGHT ON SIGNAL TRANSDUCTION IN THE APOPTOTIC PROCESS
Ilari, A., Fiorillo, A., Colotti, G.To be published.
4U8D
X-ray structure of Mg-bound human sorcin
- PDB DOI: https://doi.org/10.2210/pdb4U8D/pdb
- Classification: calcium binding protein
- Organism(s): Homo sapiens
- Expression System: Escherichia coli BL21(DE3)
- Mutation(s): No
- Deposited: 2014-08-02 Released: 2015-08-26
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.30 Å
- R-Value Free: 0.249
- R-Value Work: 0.197
- R-Value Observed: 0.200
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Sorcin | 198 | Homo sapiens | Mutation(s): 0 Gene Names: SRI |  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P30626 (Homo sapiens) Explore P30626 Go to UniProtKB: P30626 | |||||
PHAROS: P30626 GTEx: ENSG00000075142 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P30626 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| MG Query on MG | C [auth A] D [auth A] E [auth B] F [auth B] G [auth B] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.30 Å
- R-Value Free: 0.249
- R-Value Work: 0.197
- R-Value Observed: 0.200
- Space Group: P 43 21 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 117.832 | α = 90 |
| b = 117.832 | β = 90 |
| c = 86.88 | γ = 90 |
| Software Name | Purpose |
|---|---|
| XDS | data reduction |
| Aimless | data scaling |
| PDB_EXTRACT | data extraction |
| REFMAC | refinement |
| MOLREP | phasing |
| XSCALE | data scaling |
| XSCALE | data reduction |
Entry History
Deposition Data
- Released Date: 2015-08-26 Deposition Author(s): Fiorillo, A., Ilari, A., Colotti, G.
Revision History (Full details and data files)
- Version 1.0: 2015-08-26
Type: Initial release - Version 1.1: 2023-12-20
Changes: Data collection, Database references, Derived calculations, Refinement description
