Download MendeleyBinding mRNA on the archaeal translation initiation factor 2 gamma-subunit
Kravchenko, O.V., Nikonov, O.S., Arhipova, V.I., Stolboushkina, E.A., Gabdulkhakov, A.G., Nikulin, A.D., Garber, M.B., Nikonov, S.V.To be published.
4QHY
The structure of aIF2gamma subunit H20F/D152A from archaeon Sulfolobus solfataricus complexed with GDPCP
- PDB DOI: https://doi.org/10.2210/pdb4QHY/pdb
- Classification: TRANSLATION
- Organism(s): Saccharolobus solfataricus P2
- Expression System: Escherichia coli
- Mutation(s): Yes
- Deposited: 2014-05-30 Released: 2015-06-03
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 3.29 Å
- R-Value Free: 0.277
- R-Value Work: 0.226
- R-Value Observed: 0.229
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Translation initiation factor 2 subunit gamma | 415 | Saccharolobus solfataricus P2 | Mutation(s): 2 Gene Names: eif2g, SSO0412 |  | |
UniProt | |||||
Find proteins for Q980A5 (Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)) Explore Q980A5 Go to UniProtKB: Q980A5 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q980A5 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| GCP Query on GCP | C [auth A] | PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER C11 H18 N5 O13 P3 PHBDHXOBFUBCJD-KQYNXXCUSA-N |  | ||
| MG Query on MG | B [auth A] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 3.29 Å
- R-Value Free: 0.277
- R-Value Work: 0.226
- R-Value Observed: 0.229
- Space Group: I 2 3
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 187.689 | α = 90 |
| b = 187.689 | β = 90 |
| c = 187.689 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PROTEUM2 | data collection |
| PHASER | phasing |
| PHENIX | refinement |
| PROTEUM2 | data reduction |
| SADABS | data scaling |
Entry History
Deposition Data
- Released Date: 2015-06-03 Deposition Author(s): Kravchenko, O.V., Nikonov, O.S., Arhipova, V.I., Stolboushkina, E.A., Gabdulkhakov, A.G., Nikulin, A.D., Garber, M.B., Nikonov, S.V.
Revision History (Full details and data files)
- Version 1.0: 2015-06-03
Type: Initial release - Version 1.1: 2023-09-20
Changes: Data collection, Database references, Derived calculations, Refinement description
