4GBA

DCNL complex with N-terminally acetylated NEDD8 E2 peptide


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.227
  • R-Value Work: 0.194

Literature

Macromolecules
Sequence Display for 4GBA

Classification: ligase / peptide

Total Structure Weight: 56651.64

Macromolecule Entities
Molecule Chains Length Organism Details
DCN1-like protein 3 A, B 221 Homo sapiens Gene Name(s): DCUN1D3 Gene View SCCRO3
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
NEDD8-conjugating enzyme UBE2F F, G 25 Homo sapiens EC#: 6.3.2 IUBMB
Mutation: M1X
Gene Name(s): UBE2F Gene View NCE2
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
AME
Query on AME
F, G NON-POLYMER C7 H13 N O3 S --

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.227
  • R-Value Work: 0.194
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 83.46 α = 90.00
b = 44.58 β = 103.30
c = 101.22 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-07-26
  • Released Date: 2012-11-28
  • Deposition author(s): Monda, J.K., Scott, D.C., Miller, D.J., Harper, J.W., Bennett, E.J., Schulman, B.A.

Revision History

  • Version 1_0: 2012-11-28

    Type: Initial release

  • Version 1_1: 2012-12-19

    Type: Database references

  • Version 1_2: 2013-01-30

    Type: Database references