4F8Y

Complex structure of NADPH:quinone oxidoreductase with menadione in Streptococcus mutans


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.80 Å
  • R-Value Free: 0.183 
  • R-Value Work: 0.156 
  • R-Value Observed: 0.157 

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Ligand Structure Quality Assessment 


This is version 1.1 of the entry. See complete history


Literature

Complex structure of NADPH:quinone oxidoreductase with menadione in Streptococcus mutans

Wang, Z.Li, L.Su, X.-D.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
NADPH Quinone Oxidoreductase
A, B, C, D
196Streptococcus mutansMutation(s): 0 
Gene Names: SMU_1420
EC: 1.6.5.2
UniProt
Find proteins for Q8DTD1 (Streptococcus mutans serotype c (strain ATCC 700610 / UA159))
Explore Q8DTD1 
Go to UniProtKB:  Q8DTD1
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ8DTD1
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.80 Å
  • R-Value Free: 0.183 
  • R-Value Work: 0.156 
  • R-Value Observed: 0.157 
  • Space Group: P 1 21 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 50.614α = 90
b = 79.413β = 90.08
c = 106.502γ = 90
Software Package:
Software NamePurpose
ADSCdata collection
PHENIXrefinement
HKL-2000data reduction
HKL-2000data scaling

Structure Validation

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Ligand Structure Quality Assessment 


Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2012-06-06
    Type: Initial release
  • Version 1.1: 2024-02-28
    Changes: Data collection, Database references, Derived calculations