4EWE

Study on structure and function relationships in human Pirin with Manganese ion

Structural Biology Knowledgebase: 4EWE SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.56 Å
  • R-Value Free: 0.167
  • R-Value Work: 0.135

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4EWE

Classification: SIGNALING PROTEIN

Total Structure Weight: 32462.83

Macromolecule Entities
Molecule Chains Length Organism Details
Pirin A 290 Homo sapiens EC#: 1.13.11.24 IUBMB
Gene Name(s): PIR Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
EDO
Query on EDO

A 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MN
Query on MN

A MANGANESE (II) ION
Mn
WAEMQWOKJMHJLA-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.56 Å
  • R-Value Free: 0.167
  • R-Value Work: 0.135
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 42.16 α = 90.00
b = 67.03 β = 90.00
c = 107.16 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-04-26
  • Released Date: 2013-05-29
  • Deposition author(s): Liu, F., Rehmani, I., Fu, R., Esaka, S., Chen, L., Serrano, V., Liu, A.

Revision History

  • 2013-09-04
    Type: Citation | Details: Citation update