The structure of Glucose-6-phosphate isomerase (GPI) from Brucella melitensis
Clifton, M.C., Edwards, T.E., Seattle Structural Genomics Center for Infectious Disease (SSGCID)To be published.
Experimental Data Snapshot
wwPDB Validation   3D Report Full Report
Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Glucose-6-phosphate isomerase | A [auth D], B [auth A], C [auth B], D [auth C] | 553 | Brucella melitensis bv. 1 str. 16M | Mutation(s): 0  Gene Names: pgi, BMEI1636 EC: 5.3.1.9 | |
UniProt | |||||
Find proteins for Q8YF86 (Brucella melitensis biotype 1 (strain 16M / ATCC 23456 / NCTC 10094)) Explore Q8YF86  Go to UniProtKB:  Q8YF86 | |||||
Entity Groups   | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q8YF86 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
EDO Query on EDO | N [auth C] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N | |||
CA Query on CA | F [auth D] G [auth A] K [auth B] M [auth B] P [auth C] | CALCIUM ION Ca BHPQYMZQTOCNFJ-UHFFFAOYSA-N | |||
CL Query on CL | E [auth D] H [auth A] I [auth A] J [auth B] L [auth B] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |
Length ( Å ) | Angle ( ˚ ) |
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a = 71.59 | α = 95.42 |
b = 72.73 | β = 91.54 |
c = 115.25 | γ = 110.06 |
Software Name | Purpose |
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XSCALE | data scaling |
PHASER | phasing |
REFMAC | refinement |
PDB_EXTRACT | data extraction |
XDS | data reduction |