4DGA

TRIMCyp cyclophilin domain from Macaca mulatta: HIV-1 CA(O-loop) complex

Structural Biology Knowledgebase: 4DGA SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.243
  • R-Value Work: 0.196

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4DGA

Classification: ISOMERASE / VIRAL PROTEIN

Total Structure Weight: 68392.60

Macromolecule Entities
Molecule Chains Length Organism Details
TRIMCyp A, B 165 Macaca mulatta EC#: 5.2.1.8 IUBMB
Fragment: cyclophilin domain (UNP residues 304-468)
Gene Name(s): PPIA Gene View CYPA
capsid protein C, D 146 Human immunodeficiency virus 1 Fragment: cyclophilin-binding domain (UNP residues 133-277)
Mutation: L83T, V86P, H87A, A88M, I91L, A92P, M96I, R100T
Gene Name(s): gag-pol


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.243
  • R-Value Work: 0.196
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 38.59 α = 90.00
b = 111.35 β = 102.39
c = 67.76 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-01-25
  • Released Date: 2012-02-08
  • Deposition author(s): Caines, M.E.C., Bichel, K., Price, A.J., McEwan, W.A., James, L.C.

Revision History

  • 2012-04-18
    Type: Citation | Details: Citation update
  • 2012-03-28
    Type: Citation | Details: Citation update