Macromolecules
Sequence Display for 4YAY

Classification: MEMBRANE PROTEIN

Total Structure Weight: 47679.23

Macromolecule Entities
Molecule Chains Length Organism Details
Soluble cytochrome b562,Type-1 angiotensin II receptor A 414 Escherichia coli Homo sapiens Mutation: M1007W, I1102I, L1106L, ΔT7, ΔE8, ΔD9, ΔG10, ΔI11, ΔK12, ΔR13, ΔI14, ΔQ15, ΔD16
Gene Name(s): cybC AGTR1 Gene View AGTR1A AGTR1B AT2R1 AT2R1B
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Membrane Protein

Source: mpstruc | Group: ALPHA-HELICAL

Subgroup Name: G Protein-Coupled Receptors (GPCRs)

Protein Name: Angiotensin type I receptor


Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZD7
Query on ZD7

A 5,7-diethyl-1-{[2'-(1H-tetrazol-5-yl)biphenyl- 4-yl]methyl}-3,4-dihydro-1,6-naphthyridin- 2(1H)-one
C26 H26 N6 O
BFVNEYDCFJNLGN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
ZD7 IC50: 3.8 nM (93) BindingDB

N/A in BindingMoad
N/A in PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.274
  • R-Value Work: 0.228
  • Space Group: C 1 2 1

Unit Cell:

Length (Å) Angle (°)
a = 72.80 α = 90.00
b = 41.00 β = 99.40
c = 167.70 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2015-02-18
  • Released Date: 2015-04-22
  • Deposition author(s): Zhang, H., Unal, H., Gati, C., Han, G.W., Zatsepin, N.A., James, D., Wang, D., Nelson, G., Weierstall, U., Messerschmidt, M., Williams, G.J., Boutet, S., Yefanov, O.M., White, T.A., Liu, W., Ishchenko, A., Tirupula, K.C., Desnoyer, R., Sawaya, M.C., Xu, Q., Coe, J., Cornrad, C.E., Fromme, P., Stevens, R.C., Katritch, V., Karnik, S.S., Cherezov, V., GPCR Network (GPCR)

Revision History

  • Version 1_0: 2015-04-22

    Type: Initial release

  • Version 1_1: 2015-05-06

    Type: Structure summary

  • Version 1_2: 2015-05-13

    Type: Database references

  • Version 1_3: 2015-05-27

    Type: Database references

  • Version 1_4: 2017-09-06

    Type: Author supporting evidence, Derived calculations, Source and taxonomy