4X23

CRYSTAL STRUCTURE OF CENP-C IN COMPLEX WITH THE NUCLEOSOME CORE PARTICLE


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.5 Å
  • R-Value Free: 0.286
  • R-Value Work: 0.236

Literature

Macromolecules
Sequence Display for 4X23

Classification: structural protein / dna

Total Structure Weight: 359944.47


Macromolecule Entities
Molecule Chains Length Organism Details
Histone H3 A, E, K, O 98 Drosophila melanogaster Fragment: UNP RESIDUES 41-133
Gene Name(s): His3 His3:CG31613 CG31613 His3:CG33803 CG33803 His3:CG33806 CG33806 His3:CG33809 CG33809 His3:CG33812 CG33812 His3:CG33815 CG33815 His3:CG33818 CG33818 His3:CG33821 CG33821 His3:CG33824 CG33824 His3:CG33827 CG33827 His3:CG33830 CG33830 His3:CG33833 CG33833 His3:CG33836 CG33836 His3:CG33839 CG33839 His3:CG33842 CG33842 His3:CG33845 CG33845 His3:CG33848 CG33848 His3:CG33851 CG33851 His3:CG33854 CG33854 His3:CG33857 CG33857 His3:CG33860 CG33860 His3:CG33863 CG33863 His3:CG33866 CG33866
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Histone H4 B, F, L, P 79 Drosophila melanogaster Fragment: UNP RESIDUES 25-103
Gene Name(s): His4 H4 His4r H4r CG3379 His4:CG31611 CG31611 His4:CG33869 CG33869 His4:CG33871 CG33871 His4:CG33873 CG33873 His4:CG33875 CG33875 His4:CG33877 CG33877 His4:CG33879 CG33879 His4:CG33881 CG33881 His4:CG33883 CG33883 His4:CG33885 CG33885 His4:CG33887 CG33887 His4:CG33889 CG33889 His4:CG33891 CG33891 His4:CG33893 CG33893 His4:CG33895 CG33895 His4:CG33897 CG33897 His4:CG33899 CG33899 His4:CG33901 CG33901 His4:CG33903 CG33903 His4:CG33905 CG33905 His4:CG33907 CG33907 His4:CG33909 CG33909
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Histone H2A C, G, M, Q 102 Drosophila melanogaster Fragment: UNP RESIDUES 16-117
Gene Name(s): His2A H2a His2A:CG31618 CG31618 His2A:CG33808 CG33808 His2A:CG33814 CG33814 His2A:CG33817 CG33817 His2A:CG33820 CG33820 His2A:CG33823 CG33823 His2A:CG33826 CG33826 His2A:CG33829 CG33829 His2A:CG33832 CG33832 His2A:CG33835 CG33835 His2A:CG33838 CG33838 His2A:CG33841 CG33841 His2A:CG33844 CG33844 His2A:CG33847 CG33847 His2A:CG33850 CG33850 His2A:CG33862 CG33862 His2A:CG33865 CG33865
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Histone H2B D, H, N, R 90 Drosophila melanogaster Fragment: UNP RESIDUES 33-122
Gene Name(s): His2B His2B:CG17949 CG17949 His2B:CG33868 CG33868 His2B:CG33870 CG33870 His2B:CG33872 CG33872 His2B:CG33874 CG33874 His2B:CG33876 CG33876 His2B:CG33878 CG33878 His2B:CG33880 CG33880 His2B:CG33882 CG33882 His2B:CG33884 CG33884 His2B:CG33886 CG33886 His2B:CG33888 CG33888 His2B:CG33890 CG33890 His2B:CG33892 CG33892 His2B:CG33894 CG33894 His2B:CG33896 CG33896 His2B:CG33898 CG33898 His2B:CG33900 CG33900 His2B:CG33902 CG33902 His2B:CG33904 CG33904 His2B:CG33906 CG33906 His2B:CG33908 CG33908 His2B:CG33910 CG33910
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
CENP-C U, V, W, X 25 Rattus norvegicus Fragment: UNP RESIDUES 710-734
Gene Name(s): Cenpc Cenpc1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
DNA (147-MER) I, S 147 Homo sapiens 147 BP WIDOM 601 DNA FRAGMENT (+ STRAND)
DNA (147-MER) J, T 147 Homo sapiens 147 BP WIDOM 601 DNA FRAGMENT (- STRAND)


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.5 Å
  • R-Value Free: 0.286
  • R-Value Work: 0.236
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 102.99 α = 90.00
b = 176.10 β = 90.00
c = 208.85 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2014-11-25
  • Released Date: 2014-12-10
  • Deposition author(s): Jiang, J.S.
  • Previous versions: 4INM

Revision History

  • 2014-12-24
    Type: Derived calculations
  • 2016-07-13
    Type: Derived calculations